FLAIR+CT ISMAY^BRUCE MALCOLM
doneResults
S3: ahi-results/research/flair/5aea4d35/
Open in Slicer
👁 Slicer 1
👁 Slicer 2
👁 Slicer 3
👁 Slicer 4
Click Prepare workspace — volumes are downloaded from S3 and a pre-configured Slicer scene is generated (FLAIR + registered CT ).
Clinical Data (NEL · Scrawl #1310)
Presentation
- Hospital
- Shoalhaven District Memorial Hospital
- Syndrome
- Stroke
- Diagnosis
- Acute ischaemic stroke for endovascular clot retrieval without thrombolysis
- Gender
- Unknown
- Admission
- 2021-10-09 06:45
Severity & Outcome
- NIHSS at call
- 0.000000
- NIHSS day 0
- 1.0
- BP
- 147.0/100.0 mmHg
- Heart rate
- 69.0 bpm
- Premorbid mRS
- 0: No symptoms.
- Premorbid mRS (dc)
- 0.000000
- 90-day mRS
- 1.000000
Timing
- Last known well
- 2021-10-09 00:05
- CT scan
- 2021-10-09 07:10
- Neurology contact
- 2021-10-09 07:10
- Not thrombolysed
- Minor deficit","Presented to ED beyond 4.5 hours from onset of symptoms
Risk Factors
- AF
- False
- Hypertension
- True
- Diabetes
- Type II
- Hypercholesterolaemia
- True
- Prior stroke
- False
- Prior TIA
- False
- Smoking
- Former
Pre-admission Medications
- Antihypertensive
- True
- Antiplatelet
- True
- Anticoagulant
- False
- Statin
- True
Imaging Volumes — AI vs Clinical Record
| Measure | AI (mL) | Clinical record (mL) | Difference |
|---|---|---|---|
| CTP Core | — | 0.0 | — |
| CTP Penumbra | — | 10.0 | — |
| DWI Core | — | — | — |
CTP finding: Acute perfusion lesion · Quality: Good
Occlusion: Basilar
Pathology & Observations (EDL)
Admission Labs
- Creatinine
- 77.0 umoll 2021-10-11 06:37
- Glucose
- 7.2 mmoll 2021-10-09 11:45
- Platelets
- 285.0 x109l 2021-10-11 06:37
- WCC
- 10.4 x109l 2021-10-11 06:37
- HbA1c
- 48.0 mmolmol 2021-10-11 06:37
- Cholesterol
- 4.4 mmoll 2021-10-11 06:37
- LDL
- 2.5 mmoll 2021-10-11 06:37
- HDL
- 1.0 mmoll 2021-10-11 06:37
Drugs Given & Outcome
- Discharge
- Discharged (2021-10-13)
Pipeline log
Starting pipeline — mode=CT+FLAIR
Downloading FLAIR DICOMs from AHI...
Downloading CT DICOMs from AHI...
Converting FLAIR DICOMs to NIfTI...
FLAIR: /srv/research/flair/5aea4d35/nifti/flair/flair.nii.gz
Converting CT DICOMs to NIfTI...
CT: /srv/research/flair/5aea4d35/nifti/ct/ct_i00002.nii.gz
Running ANTs rigid+affine registration (CT → FLAIR space)...
Saved warped CT: /srv/research/flair/5aea4d35/ct_in_flair.nii.gz
Submitting FLAIR to MONAILabel (wmh_fazekas)...
WMH segmentation failed (non-fatal): HTTPConnectionPool(host='127.0.0.1', port=8000): Max retries exceeded with url: /infer/wmh_fazekas?output=all (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7f8fe3d379b0>: Failed to establish a new connection: [Errno 111] Connection refused'))
Uploading results to S3...