ICH c7470f0c
failedError
Traceback (most recent call last):
File "/home/ec2-user/ahir-solution/research_dashboard/pipelines/ich.py", line 65, in run
dcm2niix(bl_dcm, os.path.join(nifti_dir, "baseline"), filename="baseline")
~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ec2-user/ahir-solution/research_dashboard/pipelines/dicom_utils.py", line 156, in dcm2niix
raise RuntimeError(
f"dcm2niix failed (rc={result.returncode}):\n{result.stderr}"
)
RuntimeError: dcm2niix failed (rc=1):
Error: JPEG signature 0xFFD8FF not found at offset 3546 of /srv/research/ich/24c3e5a1/dicom/baseline/CT000001_000475.dcm
Error: Failed to decode frame 1/1 offset: 3546 bytes: 177752 format: 1.2.840.10008.1.2.4.70
No clinical record (NEL or POWNEU) found for MRN None.
LINK TO NEL MANUALLY
Enter the patient's Scrawl MRN to link their NEL record.