FLAIR+CT Holly^Leslie^^MR^
doneResults
S3: ahi-results/research/flair/f5e0ddfc/
Open in Slicer
👁 Slicer 1
👁 Slicer 2
👁 Slicer 3
👁 Slicer 4
Click Prepare workspace — volumes are downloaded from S3 and a pre-configured Slicer scene is generated (FLAIR + registered CT ).
Clinical Data (NEL · Scrawl #10557)
Presentation
- Hospital
- Dubbo Base Hospital
- Syndrome
- Stroke
- Diagnosis
- TIA
- Age
- 67.0
- Gender
- Male
- Admission
- 2026-04-29 15:30
Severity & Outcome
- NIHSS at call
- 8.000000
- NIHSS day 0
- 1.0
- BP
- 169.0/97.0 mmHg
- Heart rate
- 58.0 bpm
- Premorbid mRS
- 1: No significant disability. Able to carry out all usual activities, despite some symptoms.
- Premorbid mRS (dc)
- 0.000000
Timing
- Last known well
- 2026-04-29 13:20
- CT scan
- 2026-04-29 16:07
- Neurology contact
- 2026-04-29 15:57
- Not thrombolysed
- Minor deficit","Rapidly improving","No perfusion lesion on imaging
Risk Factors
- AF
- False
- Hypertension
- False
- Diabetes
- Type II
- Hypercholesterolaemia
- False
- Prior stroke
- False
- Prior TIA
- False
- Smoking
- Yes
Pre-admission Medications
- Antihypertensive
- False
- Antiplatelet
- True
- Anticoagulant
- False
- Statin
- False
Imaging Volumes — AI vs Clinical Record
| Measure | AI (mL) | Clinical record (mL) | Difference |
|---|---|---|---|
| CTP Core | — | — | — |
| CTP Penumbra | — | — | — |
| DWI Core | — | 0.0 | — |
CTP finding: No acute findings · Quality: Good
Pathology & Observations (EDL)
Admission Labs
- Creatinine
- 77.0 umoll 2026-04-29 16:00
- Glucose
- 5.5 mmoll 2026-04-29 15:30
- Platelets
- 178.0 x109l 2026-04-29 16:00
- WCC
- 4.8 x109l 2026-04-29 16:00
- HbA1c
- 57.0 mmolmol 2026-04-30 06:16
- Cholesterol
- 4.3 mmoll 2026-04-30 06:16
- LDL
- 2.5 mmoll 2026-04-30 06:16
- HDL
- 1.0 mmoll 2026-04-30 06:16
Drugs Given & Outcome
- Discharge
- Departedadmissionretracted (2026-04-30)
Pipeline log
Starting pipeline — mode=CT+FLAIR
Downloading FLAIR DICOMs from AHI...
Downloading CT DICOMs from AHI...
Converting FLAIR DICOMs to NIfTI...
FLAIR: /srv/research/flair/f5e0ddfc/nifti/flair/flair.nii.gz
Converting CT DICOMs to NIfTI...
CT: /srv/research/flair/f5e0ddfc/nifti/ct/ct.nii.gz
Running ANTs rigid+affine registration (CT → FLAIR space)...
Saved warped CT: /srv/research/flair/f5e0ddfc/ct_in_flair.nii.gz
Submitting FLAIR to MONAILabel (wmh_fazekas)...
WMH segmentation failed (non-fatal): HTTPConnectionPool(host='127.0.0.1', port=8000): Max retries exceeded with url: /infer/wmh_fazekas?output=all (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7f8fdd07ff00>: Failed to establish a new connection: [Errno 111] Connection refused'))
Uploading results to S3...