FLAIR+CT KOPAS^JANICE
doneResults
S3: ahi-results/research/flair/e55f3f2f/
Open in Slicer
👁 Slicer 1
👁 Slicer 2
👁 Slicer 3
👁 Slicer 4
Click Prepare workspace — volumes are downloaded from S3 and a pre-configured Slicer scene is generated (FLAIR + registered CT ).
Clinical Data (NEL · Scrawl #1117)
Presentation
- Hospital
- Shoalhaven District Memorial Hospital
- Syndrome
- Stroke
- Diagnosis
- Acute ischaemic stroke for endovascular clot retrieval without thrombolysis
- Age
- 75.0
- Gender
- Unknown
- Admission
- 2021-08-29 23:31
Severity & Outcome
- NIHSS at call
- 12.000000
- NIHSS day 0
- 17.0
- BP
- 138.0/69.0 mmHg
- Heart rate
- 78.0 bpm
- Premorbid mRS
- 0: No symptoms.
- Premorbid mRS (dc)
- 0.000000
- 90-day mRS
- 3.000000
Timing
- Last known well
- 2021-08-29 22:10
- CT scan
- 2021-08-29 23:43
- ECR performed
- True
- Neurology contact
- 2021-08-29 23:39
- Not thrombolysed
- Recent significant bleeding
Risk Factors
- AF
- False
- Hypertension
- False
- Diabetes
- No
- Hypercholesterolaemia
- False
- Prior stroke
- False
- Prior TIA
- False
- Smoking
- No
Pre-admission Medications
- Antihypertensive
- False
- Antiplatelet
- False
- Anticoagulant
- False
- Statin
- False
Imaging Volumes — AI vs Clinical Record
| Measure | AI (mL) | Clinical record (mL) | Difference |
|---|---|---|---|
| CTP Core | — | 4.0 | — |
| CTP Penumbra | — | 135.0 | — |
| DWI Core | — | — | — |
CTP finding: Acute perfusion lesion · Quality: Good
Occlusion: Left M1 middle cerebral artery
Pathology & Observations (EDL)
Admission Labs
- Creatinine
- 96.0 micromol/l 2021-08-30 00:13
- Glucose
- 5.5 mmol/l 2021-08-29 23:47
- INR
- 1.0 2021-08-30 06:41
- Platelets
- 278.0 x10^9/l 2021-08-30 00:13
- WCC
- 6.4 x10^9/l 2021-08-30 00:13
- CRP
- 2.0 mg/l 2021-08-30 00:13
Drugs Given & Outcome
- Heparin
- Given 2021-08-31 18:02
- Discharge
- Transfertohospitalinthearearegion (2021-09-06)
Pipeline log
Starting pipeline — mode=CT+FLAIR
Downloading FLAIR DICOMs from AHI...
Downloading CT DICOMs from AHI...
Converting FLAIR DICOMs to NIfTI...
FLAIR: /srv/research/flair/e55f3f2f/nifti/flair/flair.nii.gz
Converting CT DICOMs to NIfTI...
CT: /srv/research/flair/e55f3f2f/nifti/ct/ct_Eq_1.nii.gz
Running ANTs rigid+affine registration (CT → FLAIR space)...
Saved warped CT: /srv/research/flair/e55f3f2f/ct_in_flair.nii.gz
Submitting FLAIR to MONAILabel (wmh_fazekas)...
WMH segmentation failed (non-fatal): HTTPConnectionPool(host='127.0.0.1', port=8000): Max retries exceeded with url: /infer/wmh_fazekas?output=all (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7f8fe1123bd0>: Failed to establish a new connection: [Errno 111] Connection refused'))
Uploading results to S3...