FLAIR+CT BURKINSHAW^JOHN^MERVYN^MR
doneResults
S3: ahi-results/research/flair/aa2e61b7/
Open in Slicer
👁 Slicer 1
👁 Slicer 2
👁 Slicer 3
👁 Slicer 4
Click Prepare workspace — volumes are downloaded from S3 and a pre-configured Slicer scene is generated (FLAIR + registered CT ).
Clinical Data (NEL · Scrawl #1460)
Presentation
- Hospital
- Wagga Wagga Base Hospital
- Syndrome
- Stroke
- Diagnosis
- Acute ischaemic stroke for endovascular clot retrieval without thrombolysis
- Age
- 71.0
- Gender
- Unknown
- Admission
- 2021-11-09 10:04
Severity & Outcome
- NIHSS at call
- 18.000000
- NIHSS day 0
- 20.0
- BP
- 118.0/74.0 mmHg
- Heart rate
- 70.0 bpm
- Premorbid mRS (dc)
- 2.000000
- 90-day mRS
- 6.000000
Timing
- Last known well
- 2021-11-08 21:30
- CT scan
- 2021-11-09 10:30
- ECR performed
- True
- Groin puncture
- 2021-11-12 16:55
- Neurology contact
- 2021-11-09 10:46
- Not thrombolysed
- On therapeutic anticoagulation","Presented to ED beyond 4.5 hours from onset of symptoms
Risk Factors
- AF
- False
Pre-admission Medications
- Antihypertensive
- —
- Antiplatelet
- —
- Anticoagulant
- —
- Statin
- —
Pipeline log
Starting pipeline — mode=CT+FLAIR
Downloading FLAIR DICOMs from AHI...
Downloading CT DICOMs from AHI...
Converting FLAIR DICOMs to NIfTI...
FLAIR: /srv/research/flair/aa2e61b7/nifti/flair/flair.nii.gz
Converting CT DICOMs to NIfTI...
CT: /srv/research/flair/aa2e61b7/nifti/ct/ct.nii.gz
Running ANTs rigid+affine registration (CT → FLAIR space)...
Saved warped CT: /srv/research/flair/aa2e61b7/ct_in_flair.nii.gz
Submitting FLAIR to MONAILabel (wmh_fazekas)...
WMH segmentation failed (non-fatal): HTTPConnectionPool(host='127.0.0.1', port=8000): Max retries exceeded with url: /infer/wmh_fazekas?output=all (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7f8fca6ed010>: Failed to establish a new connection: [Errno 111] Connection refused'))
Uploading results to S3...