FLAIR+CT BERRY^Clive^William^Mr^

done
Case ID
6a33559f
Patient
BERRY^Clive^William^Mr^ MRN 2084037
FLAIR image set
364da153d6f0e6f238e80fd2def16614 OHIF
CT image set
93073a48ddc061a44d376e72e2e86fa2 OHIF
Created
2026-05-20T06:11
Updated
2026-05-20T06:12

Results

S3: ahi-results/research/flair/6a33559f/

Open in Slicer

👁 Slicer 1 👁 Slicer 2 👁 Slicer 3 👁 Slicer 4

Click Prepare workspace — volumes are downloaded from S3 and a pre-configured Slicer scene is generated (FLAIR + registered CT ).

⚠ Unverified link: MRN mismatch — clinical data linked by initials + admission date (DICOM MRN: 2084037, NEL MRN: 176993). Verify patient identity. Check source documentation.

Clinical Data (NEL · Scrawl #1361)

Presentation

Hospital
Lismore Base Hospital
Syndrome
Stroke
Diagnosis
Seizure
Gender
Unknown
Admission
2021-10-20 11:35

Severity & Outcome

NIHSS at call
8.000000
NIHSS day 0
9.0
BP
143.0/77.0 mmHg
Heart rate
57.0 bpm
Premorbid mRS
0: No symptoms.
Premorbid mRS (dc)
2.000000

Timing

Last known well
2021-10-20 08:45
CT scan
2021-10-20 12:05
Neurology contact
2021-10-20 12:00
Not thrombolysed
No perfusion lesion on imaging","On therapeutic anticoagulation

Risk Factors

AF
True
Hypertension
True
Hypercholesterolaemia
True
Prior stroke
True
Prior TIA
False

Pre-admission Medications

Antihypertensive
True
Antiplatelet
False
Anticoagulant
True
Statin
True
Pipeline log 
Starting pipeline — mode=CT+FLAIR
Downloading FLAIR DICOMs from AHI...
Downloading CT DICOMs from AHI...
Converting FLAIR DICOMs to NIfTI...
FLAIR: /srv/research/flair/6a33559f/nifti/flair/flair.nii.gz
Converting CT DICOMs to NIfTI...
CT:    /srv/research/flair/6a33559f/nifti/ct/cta.nii.gz
Running ANTs rigid+affine registration (CT → FLAIR space)...
Saved warped CT: /srv/research/flair/6a33559f/ct_in_flair.nii.gz
Submitting FLAIR to MONAILabel (wmh_fazekas)...
WMH segmentation failed (non-fatal): HTTPConnectionPool(host='127.0.0.1', port=8000): Max retries exceeded with url: /infer/wmh_fazekas?output=all (Caused by NewConnectionError('<urllib3.connection.HTTPConnection object at 0x7f8fe1123bd0>: Failed to establish a new connection: [Errno 111] Connection refused'))
Uploading results to S3...