FLAIR 677c9420
failedError
Traceback (most recent call last):
File "/home/ec2-user/ahir-solution/research_dashboard/pipelines/flair.py", line 179, in run
dcm2niix(flair_dcm_dir, os.path.join(nifti_dir, "flair"), filename="flair")
~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/home/ec2-user/ahir-solution/research_dashboard/pipelines/dicom_utils.py", line 229, in dcm2niix
raise RuntimeError(
f"dcm2niix failed (rc={result.returncode}):\n{result.stderr}"
)
RuntimeError: dcm2niix failed (rc=2):
Error: Unable to find any DICOM images in /srv/research/flair/2573e2ec/nifti/flair/_decomp (or subfolders 5 deep)
No clinical record (NEL or POWNEU) found for MRN 10930242.
LINK TO NEL MANUALLY
Enter the patient's Scrawl MRN to link their NEL record.