CTP d0f36bda
failedError
Traceback (most recent call last):
File "/home/ec2-user/ahir-solution/research_dashboard/pipelines/ctp.py", line 215, in run
pipeline_result = run_pipeline(
perfusion_path = mc_path,
...<3 lines>...
resume = True,
)
File "/home/ec2-user/ctp-container/ctp-mask-dev/lean_ctp_pipeline_final_complete_new.py", line 1959, in run_pipeline
aif_properties, aif_voxels, aif_log_path = determine_aif_logged(
~~~~~~~~~~~~~~~~~~~~^
ctc_volumes_raw,
^^^^^^^^^^^^^^^^
...<6 lines>...
verbose=True,
^^^^^^^^^^^^^
)
^
File "/home/ec2-user/ctp-container/ctp-mask-dev/lean_ctp_pipeline_final_complete_new.py", line 343, in determine_aif_logged
aif_properties, aif_voxels = determine_aif(
~~~~~~~~~~~~~^
ctc_volumes,
^^^^^^^^^^^^
...<3 lines>...
**kwargs,
^^^^^^^^^
)
^
File "/home/ec2-user/ctp-container/ctp-mask-dev/CT-and-MR-Perfusion-Tool/utils/determine_aif.py", line 767, in determine_aif
return determine_aif(
ctc_volumes=list(ctc_volumes),
...<25 lines>...
affine=affine,
)
File "/home/ec2-user/ctp-container/ctp-mask-dev/CT-and-MR-Perfusion-Tool/utils/determine_aif.py", line 802, in determine_aif
raise ValueError(msg)
ValueError: No AIF candidates found after adaptive thresholding attempts. Tried strict and relaxed spatial filters. Try relaxing `max_vol_thres`/`min_vol_thres`/`smoothness_threshold`, or reduce edge/lateral constraints.
No clinical record (NEL or POWNEU) found for MRN None.
LINK TO NEL MANUALLY
Enter the patient's Scrawl MRN to link their NEL record.