CTP d0f36bda
donePerfusion Summary
| Measure | Value |
|---|---|
| Ischaemic Core (ml) | 38.84 |
| Penumbra / At-risk (ml) | 0.0 |
| Mismatch (ml) | 0.0 |
| IC rCBF reference (ml/100g/min) | 44.8 |
Open in Slicer
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👁 Slicer 3
👁 Slicer 4
Click Prepare workspace — perfusion maps are downloaded from S3 and a pre-configured Slicer scene is generated (Baseline · CBF · CBV · MTT · Tmax · Core · Penumbra).
No clinical record (NEL or POWNEU) found for MRN None.
LINK TO NEL MANUALLY
Enter the patient's Scrawl MRN to link their NEL record.
Pipeline log
Looking up all image sets for study 1.3.46.670589.33.1.63910835326090236900001.5050316199332809832... Found 38 image set(s): ['0796a3ff9cbec8a905f9649f735660a0', 'b1d612df2fe9f5fc62ca78be0dc10b90', '577290346f72f81e4f3ac344f0472165', 'c955833dea2210bc294d1c713f4d853d', 'd6dc274306a9f452990b45236cbd399b', 'd0f36bdaca5124f6336794da36d745f9', '7b795a5a5b6958e644d267dc46f0e7e1', 'd5eaa9e08b367c0f957efa0cc22dad38', 'f3db4afead9b89129b898a40046249e4', '54c4de0d6f71edc90e4e7c71f5ec7446', '360f40556e8702409f54a406c796b5c3', '49459ed2c49b4cae0edd98456c080069', '8f39b12753a5c28dc0406b4a277d8a72', '579a2e64fd4a1ae546e24dc12001afc9', '882735ac7dd7d317df2be339474e52e5', 'c90b8e0fd617e74080d70972f7917b12', 'ed460ab3214f4207bfe5f2ae35de663e', 'f4e0669cd37b03e6232c82eb8fcf222d', '7d86f1af6e5d2ca1ec6428ee59e7a6b6', '19881424dd7b3604f43d1a6673e64693', 'b7d4a47755a526cb5948f83a1f9829e9', 'f55453fd3dcc8e9b64a83095f474ecad', 'a851b23c85ec8dcec85035a68b893140', 'cf21b4cc8ea3d7795ff55f984c23b4bb', 'fce5fb2384b3fdf063a79e04d21e5b87', 'cc2d74f2957f2443dc6e34c3ed8c2ee0', '1a1f6943c711eb7c86881e3bdb8c5321', 'bd8831ba4b64409374b2906bae9d9e32', '70b77aeab447c49a6b1fd50fe9a1352d', '361b72ff3e667a8b34e5633073291e58', '6cdb2386cab517f9130e1dfe149d360d', '5d5b20cb58fe1e0e9dfe480a94526277', '20a5b4bedd0fb0071b266aa6f28c1ade', 'eb53878d0a546a79ab131124706d91ce', 'ccc398fca28c31c54933434233d79203', '64b3294c0b831d97f811df90756e9153', 'dc859f0df995fc4fd183eab7a232ccbe', '32aac69f85d3c936e543eabe815185d2'] Selected series: 'PERFUSION 5MM, iDose (5)' (1.3.46.670589.33) Skipping 'SKULL THINS, iDose (3)' (not a CTP timepoint) Skipping 'MonoE66keV , MonoE66, Spectral (2)' (not a CTP timepoint) Skipping 'BRAIN THINS C-, iDose (4)' (not a CTP timepoint) Skipping 'CTA BN THINS, iDose (3)' (not a CTP timepoint) Skipping 'CTA COR 1.5MM' (not a CTP timepoint) Downloading 'PERFUSION 5MM, iDose (5)' 1.3.46.670589.33… (480 inst) Skipping 'RAPID AIF/VOF Location' (not a CTP timepoint) Skipping 'RAPID Summary slices Tmax Thresholds' (not a CTP timepoint) Skipping 'RAPID rCBF color' (not a CTP timepoint) Skipping 'CTA THINS' (not a CTP timepoint) Skipping 'RAPID Tmax color' (not a CTP timepoint) Skipping 'MonoE45keV , MonoE45, Spectral (5)' (not a CTP timepoint) Skipping 'COR BRAIN' (not a CTP timepoint) Skipping 'AX SKULL' (not a CTP timepoint) Skipping 'RAPID Summary slices CBV Thresholds' (not a CTP timepoint) Skipping 'RAPID tsMIP AIF/VOF Location' (not a CTP timepoint) Skipping 'RAPID rCBV color' (not a CTP timepoint) Skipping 'SURVIEW' (not a CTP timepoint) Skipping 'CTA AX 1.5MM' (not a CTP timepoint) Skipping 'CTA SAG 1.5MM' (not a CTP timepoint) Skipping 'CTA MIP AX , CTA MIP AX' (not a CTP timepoint) Skipping 'SAG BRAIN' (not a CTP timepoint) Skipping 'BRAIN AX 3MM, iDose (4)' (not a CTP timepoint) Skipping 'RAPID Summary slices CBF Thresholds' (not a CTP timepoint) Skipping 'Exam Summary' (not a CTP timepoint) Skipping 'SURVIEW' (not a CTP timepoint) Skipping 'CTA MIP SAG' (not a CTP timepoint) Skipping 'CTA MIP COR' (not a CTP timepoint) Skipping 'Finalized Report' (not a CTP timepoint) Skipping 'AX BRAIN' (not a CTP timepoint) Skipping 'RAPID MTT color' (not a CTP timepoint) Skipping 'RAPID Summary slices CBF/Tmax Mismatch' (not a CTP timepoint) Skipping 'RAPID CT-P Summary' (not a CTP timepoint) Skipping 'Radiation Dose Information' (not a CTP timepoint) Skipping 'BRAIN AX 3MM, iDose (4) (AI PDF)' (not a CTP timepoint) Skipping 'BRAIN AX 3MM, iDose (4) (AI SC)' (not a CTP timepoint) Skipping 'BRAIN THINS C-, iDose (4)' (not a CTP timepoint) Skipping 'BRAIN AX 3MM, iDose (4)' (not a CTP timepoint) All CTP DICOMs downloaded. Flat series: 480 files, 30 timepoints by ContentTime → splitting Split into 30 timepoint subdirs under /srv/research/ctp/792c8fe0/dicom/1.3.46.670589.33.1.63910835550404391900001.4786515963647950148_split Assembling 4D NIfTI from DICOM root... 4D shape: (512, 512, 16, 30) timepoints: 30 Z FOV: 80 mm → avoid_transverse_sinus=False Running ANTs motion correction (rigid, frame-to-frame)... Motion-corrected 4D saved: /srv/research/ctp/792c8fe0/perfusion_motion_corrected.nii.gz Baseline saved (mean of 4 frames). Submitting baseline to MONAILabel (segmentation)... Segmentation complete: /srv/research/ctp/792c8fe0/monai_label.nii.gz Running perfusion map pipeline... Maps complete. Keys: ['cbf_path', 'cbv_path', 'mtt_path', 'tmax_path', 'used_vof_scaling', 'vof_aif_ratio_first_pass', 'rcbf_path', 'core_mask_path', 'ic_ref_cbf_left', 'ic_ref_cbf_right', 'ic_ref_cbf_used', 'hemisphere_used', 'core_volume_ml', 'penumbra_path', 'penumbra_volume_ml', 'mismatch_path', 'mismatch_volume_ml', 'mismatch_ratio'] Uploading results to S3...